BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016C01SP1|AL426970
(302 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1126 452 e-127
>3x_Contig1126
Length = 5421
Score = 452 bits (227), Expect = e-127
Identities = 285/302 (94%), Gaps = 4/302 (1%)
Strand = Plus / Plus
Query: 1 gtgatgttgttttcaagaatgcataaactagaaagaagagcattcaaccaacgtcattgg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4576 gtgatgttgttttcaagaatg-ataaactagaaagaagagcattcaaccaacgtcattgg 4634
Query: 61 gccgccgcgtatgtcggaaaaacggcctcaatttgaaattattcaaggtttactagggaa 120
|||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 4635 gccgccgcttatgtcggaaaaactgcctca-tttgaaattattcaaggtttactagggaa 4693
Query: 121 aatwatgcagactttcagaactcaatggctaccatgattatggtgcgggatccactggca 180
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4694 aattatgcagactttcagaactcaatggctacc-tgattatggtgcgggatccactggca 4752
Query: 181 gaggttactggattgaaaaagatgataccctcactacctncttcccgggttgnggtgcgn 240
||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 4753 gaggttactggattgaaaaagatgataccctcactacctacttcccgggtagaggtgcaa 4812
Query: 241 nkctcatgttcagacacaaagaaggagaagaagctaggcagntcgcgtcctattggtgtt 300
|||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 4813 agatcatgttcagacacaaagaaggagaagaagctaggcagatcg-gtcatattggtgtt 4871
Query: 301 tt 302
||
Sbjct: 4872 tt 4873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2057
Number of Sequences: 1807
Number of extensions: 2057
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 302
length of database: 10,358,551
effective HSP length: 16
effective length of query: 286
effective length of database: 10,329,639
effective search space: 2954276754
effective search space used: 2954276754
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.1 bits)